Retinitis pigmentosa locus on 17q (RP17): fine localization to 17q22 and exclusion of the PDEG and TIMP2 genes

Hum Genet. 1997 Nov;101(1):13-7. doi: 10.1007/s004390050577.

Abstract

This group has previously reported the mapping of a novel locus for autosomal dominant retinitis pigmentosa (adRP) in a South African kindred to 17q. Using a new series of microsatellite markers in this study, twopoint and multipoint analysis provide evidence for the localization of the disease gene to the 17q22 region. In addition, a second South African adRP family is shown to be linked to this 17q22 locus. Disease-associated haplotypes constructed for both families and multipoint linkage analysis place the gene in the 10-cM interval between D17S1607 and D17S1874. Three candidate genes on 17q were investigated: PDEG, the gamma subunit of rod phosphodiesterase; TIMP2, tissue inhibitor of metalloproteinases-2; and PRKCA, protein kinase C alpha. Recombination events between the adRP locus and: (1) a single-stranded conformation polymorphism in PDEG; and (2) a restriction fragment length polymorphism in TIMP2 provided evidence for the exclusion of these candidate genes as being responsible for adRP in the South African kindred.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3',5'-Cyclic-GMP Phosphodiesterases / genetics
  • Base Sequence
  • Chromosome Mapping
  • Chromosomes, Human, Pair 17 / genetics*
  • Cyclic Nucleotide Phosphodiesterases, Type 6
  • DNA Primers / genetics
  • Female
  • Genes, Dominant
  • Genetic Linkage
  • Haplotypes
  • Humans
  • Isoenzymes / genetics
  • Male
  • Microsatellite Repeats
  • Pedigree
  • Polymerase Chain Reaction
  • Polymorphism, Restriction Fragment Length
  • Polymorphism, Single-Stranded Conformational
  • Protein Kinase C / genetics
  • Protein Kinase C-alpha
  • Retinitis Pigmentosa / genetics*
  • Tissue Inhibitor of Metalloproteinases / genetics

Substances

  • DNA Primers
  • Isoenzymes
  • Tissue Inhibitor of Metalloproteinases
  • PRKCA protein, human
  • Protein Kinase C
  • Protein Kinase C-alpha
  • 3',5'-Cyclic-GMP Phosphodiesterases
  • Cyclic Nucleotide Phosphodiesterases, Type 6
  • PDE6B protein, human