Isolation of human retinal genes: recoverin cDNA and gene

Biochem Biophys Res Commun. 1992 Aug 31;187(1):234-44. doi: 10.1016/s0006-291x(05)81483-4.

Abstract

A human retina cDNA library enriched for retina-specific clones was prepared by subtraction with a non-retina population of cDNA in combination with polymerase chain reaction (PCR) amplifications. A highly retina-specific cDNA clone (1190 bp) was obtained through this library encoding a 200 amino acid protein with three calcium binding sites and 87% homology to the bovine photoreceptor protein, recoverin, which has been shown to mediate the recovery of the dark current after photoactivation, and 58% homology to the calcium-binding chick cone protein, visinin. Analysis of the gene indicated a 9-10 kb single-copy gene with at least three exons and two introns. The three exons contained the entire coding sequence, and all of the calcium-binding EF-hand regions were in putative exon 1. The recoverin gene was mapped to human chromosome 17 by hybridization to a panel of human-rodent hybrid DNAs.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Binding Sites
  • Blotting, Southern
  • Calcium / metabolism
  • Calcium-Binding Proteins / genetics*
  • Cattle
  • Chickens
  • Chromosomes, Human, Pair 17
  • DNA / genetics
  • DNA / isolation & purification*
  • Exons
  • Eye Proteins*
  • Hippocalcin
  • Humans
  • Introns
  • Lipoproteins*
  • Molecular Sequence Data
  • Nerve Tissue Proteins / chemistry
  • Polymerase Chain Reaction
  • Promoter Regions, Genetic
  • Recoverin
  • Retina / chemistry*
  • Sequence Homology, Nucleic Acid

Substances

  • Calcium-Binding Proteins
  • Eye Proteins
  • Lipoproteins
  • Nerve Tissue Proteins
  • RCVRN protein, human
  • visinin
  • Recoverin
  • Hippocalcin
  • DNA
  • Calcium

Associated data

  • GENBANK/D10475
  • GENBANK/D10916
  • GENBANK/D10917
  • GENBANK/D10918
  • GENBANK/D10919
  • GENBANK/D10920
  • GENBANK/S41679
  • GENBANK/S41680
  • GENBANK/S41731
  • GENBANK/S43855