Conversion of yeast phosphoglycerate kinase into amyloid-like structure

Proteins. 2000 May 15;39(3):204-11. doi: 10.1002/(sici)1097-0134(20000515)39:3<204::aid-prot20>3.0.co;2-8.

Abstract

Yeast phosphoglycerate kinase is a structurally well-characterized enzyme consisting of 415 amino acids without disulfide bonds. Anion-induced refolding from its acid-unfolded state gives rise to the formation of worm-like amyloid fibrils with a persistence length of 73 nm. Electron microscopy and small-angle X-ray scattering data indicate that the fibrils have an elliptical cross-section with dimensions of 10.2 nm x 5.1 nm. About half of all amino acids are organized in form of cross-beta structure which gives rise to typical infrared spectra, X-ray diffraction and yellow-green birefringence after Congo red staining. The kinetics of amyloid formation, monitored by infrared spectroscopy, dynamic light scattering and X-ray scattering, was found to be strongly dependent on protein concentration. The infrared data indicate that the formation of cross-beta structure practically comes to an end already after some hours, whereas the length-growth of the amyloid fibrils, monitored by small-angle X-ray scattering, was not yet completed after 1,300 hours.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amyloid / chemistry*
  • Amyloid / metabolism
  • Amyloid / ultrastructure
  • Congo Red
  • Light
  • Microscopy, Electron
  • Phosphoglycerate Kinase / chemistry*
  • Phosphoglycerate Kinase / metabolism
  • Phosphoglycerate Kinase / ultrastructure
  • Protein Folding
  • Protein Structure, Quaternary
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae / ultrastructure
  • Scattering, Radiation
  • Spectrophotometry, Infrared
  • X-Rays

Substances

  • Amyloid
  • Congo Red
  • Phosphoglycerate Kinase