Effect of lysine residues on the deamidation reaction of asparagine side chains

Biopolymers. 2000 Feb;53(2):213-9. doi: 10.1002/(SICI)1097-0282(200002)53:2<213::AID-BIP11>3.0.CO;2-C.

Abstract

The effect of lysine residues on the deamidation reaction of the asparagine side chain has been studied on the peptide and on its lysine-acetylated derivative in a wide range of pH values. The amino acid sequence of these peptides is similar to the local sequence flanking the labile Asn-67 in RNAse A. The experimental data show that Lys influences both the deamidation rate and the relative yield of the two reaction products, i.e., the aspartic acid and beta-aspartic acid containing peptide. These effects are pH dependent and can be rationalized based on the mechanism previously proposed for the deamidation reaction via succinimide derivative.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides / chemistry
  • Amino Acid Sequence
  • Asparagine / chemistry*
  • Isomerism
  • Lysine / chemistry*
  • Peptides, Cyclic / chemical synthesis
  • Peptides, Cyclic / chemistry*

Substances

  • Amides
  • Peptides, Cyclic
  • Asparagine
  • Lysine